public interface VariantContextProcessor extends Closeable
VariantContext
processing pipeline, designed as a sinkModifier and Type | Method and Description |
---|---|
void |
close()
Mark processing as done, no more variants will come in.
|
void |
put(htsjdk.variant.variantcontext.VariantContext vc)
Put a Variant Context into the filter.
|
void put(htsjdk.variant.variantcontext.VariantContext vc) throws VariantContextFilterException
vc
- VariantContext
to put into the filter.VariantContextFilterException
- on problems during the filtrationvoid close()
close
in interface AutoCloseable
close
in interface Closeable
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