public final class GenomeRegionList extends Object
GenomeRegion
objectsConstructor and Description |
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GenomeRegionList(Iterable<GenomeRegion> regions) |
Modifier and Type | Method and Description |
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boolean |
equals(Object obj) |
GenomeRegion |
getGenomeRegion(String name) |
com.google.common.collect.ImmutableList<GenomeRegion> |
getGenomeRegions() |
com.google.common.collect.ImmutableMap<String,GenomeRegion> |
getNameToRegion() |
int |
hashCode() |
long |
lengthUpTo(String contig,
int pos) |
void |
setGenomeRegions(com.google.common.collect.ImmutableList<GenomeRegion> genomeRegions) |
void |
setNameToRegion(com.google.common.collect.ImmutableMap<String,GenomeRegion> nameToRegion) |
String |
toString() |
long |
totalLength() |
public GenomeRegionList(Iterable<GenomeRegion> regions)
public long lengthUpTo(String contig, int pos)
public long totalLength()
public GenomeRegion getGenomeRegion(String name)
public com.google.common.collect.ImmutableList<GenomeRegion> getGenomeRegions()
public void setGenomeRegions(com.google.common.collect.ImmutableList<GenomeRegion> genomeRegions)
public com.google.common.collect.ImmutableMap<String,GenomeRegion> getNameToRegion()
public void setNameToRegion(com.google.common.collect.ImmutableMap<String,GenomeRegion> nameToRegion)
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