Package de.charite.compbio.jannovar.pedigree.compatibilitychecker

Interface Summary

Interface	Description
InterfaceVariantContextCompatibilityChecker	Interface for a VariantContextCompatibilityChecker.

Class Summary

Class	Description
AbstractVariantContextCompatibilityChecker	Abstract helper class for checking a List of VariantContext for compatibility with a Pedigree .
InheritanceCompatibilityChecker	Decorator for Pedigree that allows checking whether a Genotype call of a VariantContext is compatible with a selected mode of inheritance.
InheritanceCompatibilityChecker.Builder	Builder for a compatibility checker.

Exception Summary

Exception	Description
InheritanceCompatibilityCheckerException	Exception that occurs when using invalid InheritanceVariantContextList or Pedigree objects in the compatibility checking.