de.charite.compbio.jannovar.annotation

Class AllAnnotationListTextGenerator

java.lang.Object

de.charite.compbio.jannovar.annotation.VariantAnnotationsTextGenerator

de.charite.compbio.jannovar.annotation.AllAnnotationListTextGenerator

Deprecated.

@Deprecated
public final class AllAnnotationListTextGenerator
extends VariantAnnotationsTextGenerator

Decorator for VariantAnnotations for generating variant annotation strings for all variants

Author:

Manuel Holtgrewe, Peter N Robinson

Constructor Summary

Constructors

Constructor and Description
AllAnnotationListTextGenerator(VariantAnnotations annotations, int alleleID, int altCount) Deprecated.

Method Summary

Methods inherited from class de.charite.compbio.jannovar.annotation.VariantAnnotationsTextGenerator

buildEffectText, buildHGVSText, getAlleleID, getAltCount

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AllAnnotationListTextGenerator

public AllAnnotationListTextGenerator(VariantAnnotations annotations,
                                      int alleleID,
                                      int altCount)

Deprecated.