Q - RUN INFO ############ General information =================== Q Version: 0.06 Authors: Peter Hansen Peter Nick Robinson Execution time: Mon Dec 29 17:01:41 2014 Input ===== treatment-sample: wgEncodeHaibTfbsHct116Pol24h8V0416101AlnRep1.bam control-sample: wgEncodeHaibTfbsHct116RxlchV0416101AlnRep1.bam bed-hit-dist: None Peak Calling Arguments ====================== fragment-length-average: not specified, will be determined fragment-length-deviation: 50 keep-dup: 0 top-n: 100000 p-value-cutoff: not specified, will use top-n General Arguments ================= out-prefix: Hct116Pol24h8Rep1 thread-num: 7 verbose: 1 Binding Characteristics Arguments For Fragment Length Estimation ================================================================ step-num: 1000 binding-characteristics-only: 0 UCSC Track Options ================== write-bedgraph-treatment: 1 write-bedgraph-control: 1 Advanced Options ================ write-bed: None bed-radius: 1000 Output ====== runinfo: Hct116Pol24h8Rep1-Q-runinfo.txt binding-characteristics: Hct116Pol24h8Rep1-Q-binding-characteristics.R quality-statistics: Hct116Pol24h8Rep1-Q-quality-statistics.tab summit-info: Hct116Pol24h8Rep1-Q-summit-info.tab narrowPeak: Hct116Pol24h8Rep1-Q-narrowPeak.bed bedGraph-treatment: Hct116Pol24h8Rep1-Q-treatment.bedgraph bedGraph-control: Hct116Pol24h8Rep1-Q-control.bedgraph