Q - RUN INFO
############

General information
===================
Q Version:              1.2.0
Authors:                Peter Hansen <peter.hansen@charite.de>
                        Peter Nick Robinson <peter.robinson@charite.de>
Execution time:         Mon Dec  7 19:40:56 2015

Input
=====
treatment-sample:       ../data/preprocessed_final/SRR1175698_chr_filtered/SRR1175698_chr_filtered_filtered_sorted.bam
control-sample:         None
bed-hit-dist:           None

Peak Calling Arguments
======================
nexus-mode:                        1
fragment-length-average:           not specified, will be determined by qfrag-length-distribution plot
fragment-length-deviation:         5
keep-dup:                          1
top-n:                             100000
p-value-cutoff:                    not specified, will use top-n

General Arguments
=================
out-prefix:                        SRR1175698
thread-num:                        1
verbose:                           1

Binding Characteristics Arguments For Fragment Length Estimation
================================================================
step-num:                          100
binding-characteristics-only:      0
qfrag-length-distribution:      0

UCSC Track Options
==================
write-bedgraph-treatment:          0
write-bedgraph-control:            0

Advanced Options
================
write-bed:                         None
bed-radius:                        1000

Output
======
runinfo:                           SRR1175698-Q-runinfo.txt
binding-characteristics:           SRR1175698-Q-binding-characteristics.R
quality-statistics:                SRR1175698-Q-quality-statistics.tab
summit-info:                       SRR1175698-Q-summit-info.tab
narrowPeak:                        SRR1175698-Q-narrowPeak.bed